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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913825.1_cds_XP_016463816.1_56905
CDS Infomation

[gene=LOC107786828] [db_xref=GeneID:107786828] [protein=magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic-like] [protein_id=XP_016463816.1] [location=complement(join(27433..27696,28033..28131,28263..28590,28697..28761,29654..30112))] [gbkey=CDS]
Sequence

ATGGCAGCAGAAATGGCTTTACTAAAACCAATTACCAAATTCAACACCTTTAACACCACC
ACCACTTCACGGCTGAGCAACCGCAGACTGCCGTTCACAGTGAGAATGTCAGCCACCACA
ACTCCACCAACTTCAAAACCAACCAAGAAAGCTCAGAAACAAGGAATTAAAGAGTCCCTT
TTGACACCAAGATTTTACACAACTGATTTTGATGAAATGGAGACACTTTTCAACACTGAA
ATCAACAAGAACTTGAATGAAGCTGAGTTTGAGGCTCTCTTGCAGGAATTCAAGACTGAT
TATAATCAGACTCACTTTGTTAGGAACAAGGAGTTTAAAGAAGCTGCTGATAAAATTCAG
GGACCTCTTAGGCAAATATTTGTTGAATTCTTGGAAAGGTCTTGCACTGCTGAGTTCTCT
GGTTTTCTTCTCTACAAGGAGCTTGGAAGGAGGCTCAAGAAAACTAATCCCGTCGTTGCA
GAGATTTTCTCCCTCATGTCCAGGGATGAAGCTCGCCATGCTGGGTTTTTGAACAAGGGT
TTATCTGATTTCAATTTGGCATTGGACTTGGGTTTTTTGACAAAAGCGAGAAAATACACT
TTCTTCAAGCCAAAGTTCATCTTCTATGCAACTTACTTGTCTGAGAAAATTGGATACTGG
AGGTACATTACCATATACAGGCATCTCAAGGCCAATCCTGAGTACACATGTTATCCAATT
TTCAAGTACTTTGAGAACTGGTGCCAGGACGAGAACCGCCACGGTGATTTCTTCTCTGCT
TTGATGAAAGCACAGCCTCAGTTCCTCAATGACTGGAAGGCAAAGTTGTGGTCTCGCTTC
TTCTGCCTTTCGGTTTATGTCACAATGTACTTGAATGACTGCCAAAGAACAGATTTCTAT
GAAGGCATTGGGCTTAACACCAAAGAATTTGACATGCATGTCATCATTGAGACAAACCGC
ACAACAGCAAGGATTTTCCCTGCTGTCCTTGACGTTGAGAACCCAGAATTCAAGAGAAAG
TTGGACAGGATGGTGGAGATTAACCAAAAAATACTTGCTGTTGGGGAGACTGATGACATT
CCACTGGTGAAGAATTTCAAAAGGATCCCTCTGATTGCAGCTCTGGCTTCTGAGTTATTG
GCCGCATATCTCATGAAACCCATTGAGTCAGGTTCAGTTGATTTTGCAGAGTTTGAACCA
CAACTCGTCTACTAA

Peptide Sequence

PEP ID

XP_016463816.1
PEP Infomation

PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic-like [Nicotiana tabacum]
Sequence

MAAEMALLKPITKFNTFNTTTTSRLSNRRLPFTVRMSATTTPPTSKPTKKAQKQGIKESL
LTPRFYTTDFDEMETLFNTEINKNLNEAEFEALLQEFKTDYNQTHFVRNKEFKEAADKIQ
GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKG
LSDFNLALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEYTCYPI
FKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWSRFFCLSVYVTMYLNDCQRTDFY
EGIGLNTKEFDMHVIIETNRTTARIFPAVLDVENPEFKRKLDRMVEINQKILAVGETDDI
PLVKNFKRIPLIAALASELLAAYLMKPIESGSVDFAEFEPQLVY

Transcript Sequence

Gene sequence data has not been registered.